Material for the first Cellular Automata lecture

  • Lecture notes (pdf)
  • matlab code for 1D CA (ca_1D.m)
  • matlab code for the Game of Life (calife.m) from http://instruct1.cit.cornell.edu/courses/bionb441/CA/
  • matlab code for the SIR model (sir.m)
  • extra links to check: Mirek's Cellebration, CA Links, Langton's Ant

    Material for the Markov Chains lecture

  • Lecture notes (pdf)
  • matlab code for the Island model (stochastic simulations) (island1.m)
  • matlab code for the Island model (matrix method) (island2.m)
  • matlab code for the Genetic Drift model (drift.m)
  • matlab code for the absorption probability and time (fixation.m)

    Material for the Stochastic Cellular Automata lecture

  • Lecture notes (postscript)
  • matlab code for the Voter model (voter.m)
  • matlab code for the Spatial Prisoner's Dilemma model (spd.m)
  • matlab code for the One Locus model (one_locus.m)

    Material for the Partial Differential Equations lecture

  • Lecture notes (postscript)
  • diffusion.m
  • fisher.m
  • hybrid.m
  • hybrid_qt.m

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